Sequence data
6 tools
GFF3 CDS phase continuity
Compare supplied CDS phases along each Parent in transcript order.
UtilityHMMER domain coverage union
Merge retained domain positions per sequence/profile pair without counting overlaps twice.
UtilityFASTQ mate-ID comparison
Compare read identifiers at matching positions and list missing or repeated IDs.
UtilityStockholm gap-column trimmer
Remove alignment columns above a chosen unweighted gap fraction and export aligned FASTA.
UtilityNEXUS charset overlap map
Expand explicit character sets and find overlaps and uncovered sites.
UtilityVCF local genotype expansion
Map an extracted Number=LG field through LAA into global genotype slots.
Utility